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Partner in the Spotlight

Meet the Women in AutoCRAT: Two Postdoctoral Researchers at UNIGE

Dr Elisabetta Palamà, UNIGE

Dr Cansu Gorgun, UNIGE

Danielle Nicholson, Pintail Limited pitched some questions to the postdocs at the University of Genova Drs Elisabetta Palamà and Cansu Gorgun to continue our series of interviews with women researchers in AutoCRAT.

Danielle: Thank you both for agreeing to communicate in this way and share your thoughts. This is very helpful to give everyone a better idea about how you work and the University of Genova’s work within AutoCRAT.

Danielle: Is osteoarthritis (OA) very prevalent in Italy?

Elisabetta: In Italy, rheumatic diseases affect 5,500,000 people, which is about 10% of the total population. OA is by far the most common disease among rheumatic patients (72.6% of rheumatic diseases).  Considering that Italy has a ‘greater than 65-years-old’ population percentage among the highest in Europe (22.8%), OA is becoming an issue affecting a large part of the population. (1)

Cansu: From the country point of view, the OA burden in Italy is mostly psychical and psychological. Especially the difficulties in maintaining their activities of daily living among OA patients dramatically affects the quality of life. (2)

 Danielle: How did you get interested in regenerative medicine and cell biology?

Cansu: When I was writing my bachelor thesis, I found a paper about tissue engineering and regenerative medicine and just realized that I had not known anything about cell culture. So, I decided to do my master’s degree in the Stem Cell Biology Department, and suddenly I entered the ‘Regenerative Medicine’ world. But I can say that even though I completed my PhD in Regenerative Medicine and Tissue Engineering, and I am a postdoctoral fellow in this field, still the multidisciplinary challenges in the regenerative field are quite fascinating for me, every day is a new adventure and there is always a lot to learn!

Elisabetta: Like many scientists, I have been interested in science since I was a child. I was interested in how the world works and this pushed me to undertake a scientific career. In my master’s thesis, I followed a project on the regeneration of myelin and Schwann cells. This regenerative medicine field really fascinated me, so later I looked for a PhD in Regenerative Medicine and Tissue Engineering to improve my knowledge.

Danielle:  Tell us a bit about the AutoCRAT research team at the University of Genoa (UNIGE). What are your roles within it? Where are you situated?

Cansu: Our AutoCRAT research team is situated within the Department of Experimental Medicine (DIMES), UNIGE.  To the AutoCRAT project, Prof. Chiara Gentili’s research team at the Department of Experimental Medicine (DIMES, https://dimes.unige.it/) at the University of Genoa brings many years of experience and expertise in cell production and animal models of regenerative medicine, including the production of and optimisation of mesenchymal stem cells and extracellular vesicles (EVs). Elisabetta and I are on Prof. Gentili’s team which currently consists of two post-doctoral researchers, one PhD student, one Master student and two Bachelor students. Our laboratory is inside a public hospital (Ospedale Policlinico San Martino) and we also have access to the research facilities of the hospital. Our research is focused on the EVs in cartilage biology and their biological function in OA treatment. 

Elisabetta: I have a common research interest with Cansu. So, we work together on our experiments such as EV  isolation, characterization and biological validation. Recently, we started to explore the world of proteomics, in collaboration with the proteomic facility of Policlinico San Martino.

Danielle: Do you have connections within the hospital? If so, do you have any interactions with any OA patient groups?

Cansu: Even though our laboratory is located inside the public hospital in Genova, unfortunately, we have never had contact with OA patients directly. Via clinicians, we collect patients’ cartilage samples resulting from knee replacement surgeries. 

Elisabetta: We normally go into surgery rooms only to take samples, never interacting with the patients. It would be interesting and exciting to be a part of a clinical trial team and have the chance to enter this field.

Danielle: What is your favourite aspect of your work?

Cansu: For me, the best is to do experiments. The preparation, planning and waiting to see and analyze the results are the favourite aspects for me. Sometimes the results can be not so promising but that’s why it is called an experiment. 

Elisabetta: I think I like every single aspect of this work, even failure. There is no growth without failure! Then of course I love to plan and carry out experiments, I like writing and reading to learn more from other groups. I also like to supervise students, especially when after so much effort and teaching, they become good, independent and interested young researchers.

 Danielle: What is the most exciting aspect of AutoCRAT?

Cansu: I think it is the diversity. We have different research groups, from different backgrounds and from different countries and cultures. Most importantly the diverse, interdisciplinary aspect of AutoCRAT drives the success of the project. 

Elisabetta: I totally agree with Cansu. It is always nice to create a link with different groups and combine different minds for a common aim. AutoCRAT will also have a great impact on healthcare and on science, developing new technologies and therapies.

 Danielle: What do you like to do in your free time in and around Genova?

Cansu: I moved to Genoa from Turkey around four years ago and from that moment, I spent all my free time discovering food in Genoa. And honestly, I can say that I can still find new food around the city :) And of course, the time left over from the amazing Italian food is spent on discovering the Ligurian coast and hills. 

Elisabetta: I moved to Genova in 2015, leaving my family in the South of Italy. Now I live with my boyfriend and our cute dachshund, Kimi :) So I normally spend my free time going for long and nice walks in and around Genova.

(1) https://ec.europa.eu/eurostat/statistics-explained/index.php?title=Archive:Struttura_e_invecchiamento_della_popolazione#:~:text=Per%20quanto%20riguarda%20il%20numero,4%20%25)%20quelle%20pi%C3%B9%20basse.​​

(2) https://www.statista.com/statistics/785104/elderly-population-in-italy/

Meet the Women in AutoCRAT: Two Postdoctoral Researchers at UNIGE2021-10-29T08:07:09+00:00

Meet the Women in AutoCRAT: Leiden University Medical Center’s team

Prof. Ingrid Meulenbelt

Prof. Yolande F.M. Ramos

Danielle Nicholson, Pintail Limited spoke with Leiden University Medical Center Profs. Ingrid Meulenbelt and Yolande F. M. Ramos via Zoom to kick off our series of interviews with women researchers in AutoCRAT.

Danielle: Ingrid, Yolande, thank you for agreeing to speak with me about your work and congratulations on the publication of your recent paper. That’s really exciting news and very important for AutoCRAT.

Danielle: What is your assessment of the current state of osteoarthritis (OA) treatment and care?

Ingrid: It’s quite poor. There’s not much out there for people with OA. They are suffering from pain and problems in mobility already at 55 years of age and onwards. There is nothing for them yet so they are being almost patronized by the offer of physiotherapy and then painkillers. They are kept in a patched-up state until they are eligible for joint replacement surgery from about 70 years of age. This is currently the only disease-modifying treatment that we have right now. I think particularly the people with OA between 55 to 70-years of age who are still part of the workforce do not have any real options. In that respect, care is minimal. We know this from our patient and public participation arthritis group (PPA-Leiden). These people are searching the web for any treatment out there, something that they can do themselves. There is a lot of false hope.

Danielle: Why did you establish the PPA group?

Ingrid: Initially, it was the funding agencies in the Netherlands who believed that it was important to involve patients in research project design. But once we started the PPA group, we realized it was a highly valuable exercise for us and for the PhD students to engage with the patients because we are not medical doctors. The group provides an additional dimension to the work we are doing. This is an enrichment forwards and back. The group helps us to communicate our fundamental research, especially our abstract -omics work, in an understandable way.

Danielle: With regards to your recent publication, “Cartilage from human‑induced pluripotent stem cells: comparison with neo‑cartilage from chondrocytes and bone marrow mesenchymal stromal cells” Cell and Tissue Research, July 9th, 2021 its graphic (below) gives a helpful snapshot of the study design. It is a great tool to communicate the results to non-specialists.

Ingrid: It also helps us make the protocol for the medical ethical committee which inputs into the patient information leaflet.

Danielle: Can you please talk a bit about your research group and your roles within it? Where are you situated?

Ingrid: I’m the Head of the OA Research Group at the LUMC. Yolande is the most senior researcher in my lab and in that respect, she is also partly in charge of the staffing and guides the PhD students. She also does research in the lab. She is my right hand in that respect.

We are situated in the Research Tower next to the LUMC. In the OA Group, apart from Yolande, there are 3 more senior researchers, and we have 7 PhD students and a technician. We are situated within the Biomedical Data Science Department, a result of my background in genetic epidemiology. I started off trying to determine the genes that are causing OA. We gained an in-depth understanding of this in part due to the benefit of the data science people around us. When we identified a couple of the genes that we thought were interesting and could be involved in the underlying pathophysiology of OA we shifted focus to try to determine the function of these genes. What were these genes doing in the cartilage tissue? This work made us realise if you want to do functional work you need tissues to work with. This was why we started the Research in Articular Artrose Kraakbeen RAAK study, for OA articular cartilage research: https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0103056). Because we are near the hospital, we can obtain materials from people that undergo joint replacement surgery as a result of OA. If a patient is undergoing joint replacement surgery in the morning, we get a call when the surgery is finished. From the surgical waste material, we can obtain cartilage and bone, but also cells. We create molecular profiles from the cartilage and bone, as in AutoCRAT, and with the cells, we generate disease models. We tried to regenerate cartilage and bone from the cells that we took from the patients. Because we wanted a more sustainable source of cells, we started with stem cell research, employing Yolande’s cell biology expertise. We evolved from a molecular, cellular, and genetic epidemiological group to a much more fundamental biological group. This combination of molecular epidemiology, -omics and cell biology has made our OA group stronger in research proposals. In AutoCRAT, we use our cell biology expertise with stem cells and combine this with -omics data to determine the mechanisms of action of the cells involved.

Danielle: What is your favourite aspect of your work?

Yolande: My work is very diverse: there is never a dull moment. No two days are ever the same. One day, I could take part in an interview, another I am talking to patients. Then, I am going to the lab to check my cells. I never have the same day twice. Science fascinates me, and as a result, the work is fulfilling.

Ingrid: Our work is dynamic and you are at the forefront of what is known, but the pitfall of what we do is that the work is never finished!

Danielle: The LUMC are ahead of the cellular therapeutics curve in many ways. What are some practical hurdles that must be overcome to make cell therapies widely available?

Ingrid: I try not to think too much about it yet. If you are realistic, and you speak with other people then we have a long way to go. Our OA group are still working quite fundamentally in that sense. As soon as we think about cell therapies with iPSCs, we need to have GMP facilities, GMP cells, cleanrooms and the regulatory rules! It is unbelievable what we must do. This is not something we can do as a small group.

As for the new centre, ​​NECSTGEN (Netherlands Centre for the Clinical Advancement of Stem Cell and Gene Therapies), it is being built. It is a large institute. The idea is beautiful- a forward-planning institute, nearby, linked to LUMC and that could take care of the facilities and legislation that we would need for human studies and therapies.

Yolande: In research such as in AutoCRAT, one uses a lot of animal-derived reagents. When you shift to developing a therapy for humans, as part of the GMP and because we are accustomed to the animal-derived reagents, the alternative reagents could make the experiments and therapies much more expensive. This is another hurdle.

Danielle: In your opinion what is the most exciting aspect of AutoCRAT?

Yolande: For me, it is really exciting that so many partners within Europe aim at one same research goal. Together, we combine knowledge capacity and practical expertise to arrive at one outcome- for the patient. There is a really good synergy among the partners, and this helps to advance toward this aim together!

Ingrid: I agree, and indeed, the project has a very open atmosphere without any competition, we are pushing forward and aiming for that one goal! There is always competition going on in the field, at various levels. Mary is doing a good job to connect us and make sure we are collaborating without being protective of the work we are doing.

Danielle: What do you like to do in your free time in and around Leiden?

Ingrid: Well, I do not live in Leiden but close by, near the sea. I really enjoy being by the shore, running near the dunes and enjoying these things with everyone I love.

Yolande: I live in Amsterdam. I just love the cultural environment there. I love visiting museums on the weekends, walking around Amsterdam, enjoying the architecture and the parks.

Danielle: Do you have any advice for Early Stage Researchers looking to get into cell therapy research?

Ingrid: Don’t let others get you down. Don’t let yourself get too distracted by the grant-writing and all of the other things you will need at the end. Enjoy the dynamics of the field.

Danielle: Thank you both for meeting with me and sharing your thoughts. This is the next best thing to a face-to-face meeting which I hope will happen before too long passes!

Meet the Women in AutoCRAT: Leiden University Medical Center’s team2021-10-28T19:46:08+00:00

LUMC publishes the first AutoCRAT-acknowledged study!

Congratulations to the team of Alejandro Rodríguez Ruiz, Amanda Dicks, Margo Tuerlings, Koen Schepers, Melissa van Pel, Rob G. H. H. Nelissen, Christian Freund, Christine L. Mummery, Valeria Orlova, Farshid Guilak, Ingrid Meulenbelt, and Yolande F. M. Ramos! Their study entitled “Cartilage from human‑induced pluripotent stem cells: comparison with neo‑cartilage from chondrocytes and bone marrow mesenchymal stromal cells” was published open-access in the journal Cell and Tissue Research on July 9th, 2021.

Download the paper here.

LUMC publishes the first AutoCRAT-acknowledged study!2021-07-12T14:01:29+00:00

Congratulations to Prof. Frank Barry for election to the Royal Irish Academy!

Prof. Frank BarryNUI Galway academic Professor Frank Barry has been elected as a Member of the Royal Irish Academy (https://www.ria.ie/about) for his exceptional contribution to the sciences, humanities and social sciences as well as to public service. The NUI Galway academic was among 27 new members admitted to the academy by Dr Mary Canning, President of the Academy, in a virtual ceremony on May 21st, 2021. 

Frank Barry is a Professor of Cellular Therapy at the Regenerative Medicine Institute in NUI Galway and Visiting Scientist at the Schroeder Arthritis Institute in Toronto. His research interests include stem cell biology and the development of cell-based repair strategies for osteoarthritis. In a career that has spanned both industry and academic research, he has contributed to the fields of tissue engineering and regenerative medicine by developing innovative and successful cellular therapies for tissue repair, joint injury and arthritic disease. He has published widely in the areas of mesenchymal stromal cell biology, cartilage repair and cellular therapy, and has been the recipient of the Marshall Urist Award for excellence in tissue regeneration research from the Orthopaedic Research Society.

Welcoming the newly admitted members, Dr Mary Canning, President of the Royal Irish Academy, said: ‘These 27 new members are recognised for their scholarly achievements, typically reflecting many years of research, or for significant contributions to Irish society. They bring international academic distinction to our country and we should be immensely proud of these remarkable women and men. As Members of the Academy, they will strengthen our capacity to provide expert advice on Higher Education and Research policy.”

Election to membership of the Royal Irish Academy is the highest academic distinction in Ireland. The Academy has been honouring Ireland’s leading contributors to the world of learning since its establishment in 1785 and currently have 637 members.

Congratulations to Prof. Frank Barry for election to the Royal Irish Academy!2021-07-12T13:46:57+00:00

AutoCRAT partners at DIMES, Universita degli Studi di Genova present results at ISEV meeting

At the International Society Extracellular Vesicles meeting, held online May 18th- 21st, 2021, AutoCRAT partners at Universita degli Studi di Genova presented AutoCRAT results in both an oral presentation and a poster. More than 1,300 delegates attended the virtual meeting!

Poster PS08.12, titled “Comparative analysis of extracellular vesicles (EVs) derived from adipose tissue- and bone marrow-derived mesenchymal stromal cells” was presented by Dr Cansu Gorgun. Co-authors on this work include Dr Maria Elisabetta Federica Palamà, Department of Experimental Medicine (DIMES), University of Genoa, Daniele Reverberi – U.O. Molecular Pathology, IRCCS Policlinico San Martino, Genoa, Roberta Tasso – Researcher, University of Genova, and Prof. Chiara Gentili, Professor, Department of Experimental Medicine (DIMES), University of Genoa.

The oral presentation for ISEV 2021, titled “Clinical grade MSC-EVs promote human cartilage recovery in vitro” was delivered by Dr Maria Elisabetta Federica Palama,  post-doctoral fellow, Department of Experimental Medicine (DIMES), University of Genoa. This work was co-authored by: Simona Coco-  IRCCS Policlinico San Martino, Genoa, Daniele Reverberi- U.O. Molecular Pathology, IRCCS Policlinico San Martino, Genoa, Georgina Margaret- REMEDI, NUI Galway, Dario Pisignano-  Nanoscience Institute CNR-NANO (NEST), Pisa, Italy, Katia Cortese- Department of Experimental Medicine (DIMES), University of Genoa, Prof Frances Peter Barry- REMEDI, NUI Galway, Prof Mary Murphy- REMEDI, NUI Galway, and Prof. Chiara Gentili Department of Experimental Medicine (DIMES), University of Genoa, Italy.

The International Society for Extracellular Vesicles is the leading professional society for researchers and scientists involved in the study of microvesicles and exosomes.  With nearly 1,000 members, ISEV continues to be the leader in advancing the study of extracellular vesicles.  Founded in 2012 in Sweden, ISEV has since moved its headquarters to the United States.  Through its programs and services, ISEV provides essential training and research opportunities for those involved in exosome and microvesicle research.

AutoCRAT partners at DIMES, Universita degli Studi di Genova present results at ISEV meeting2021-06-10T12:46:42+00:00

Partner in the Spotlight: Valitacell

Headquartered in Dublin, Valitacell (https://www.valitacell.com/) is a biotechnology SME developing innovative technologies to aid and improve drug discovery and development. Founded in 2014, their main focus is on developing analytical technologies to assess key process parameters and product critical quality attributes in both biologics and cell therapy biomanufacturing. With thirteen employees, Valitacell’s combined knowledge of bioprocessing with deep learning and predictive analytics delivers an unprecedented and unique level of bioprocess performance.

Within AutoCRAT, Valitacell is developing their Quantum and ChemStress technology platforms for human mesenchymal stromal cell (hMSC) characterisation, focusing on hMSC secretome assessment and functional profiling during bioreactor-based expansion. These analytical tools will be fully automated within the AutoCRAT QC arm at the IPT Fraunhofer facility in Germany.

Valitacell Technologies: The Quantum platform underpins a range of simple, high-throughput target quantification and detection assays.  It is based on fluorescence polarisation technology which we use to measure probe: target interactions. Fluorescence Polarisation-based detection can be performed on all multimode plate readers, and is fully automatable, thereby allowing fully scalable workflows. In AutoCRAT, Valitacell is investigating the use of their Quantum platform in hMSC secretome assessment, focusing on specific secreted factors of interest such as extracellular vesicles.  ChemStress Fingerprinting is an information-rich, analytical assay supplying data on the functional quality of cells in specific culture media environments. This novel platform characterises cells using a panel of specific, small molecule chemical stressors to generate a unique biological signature or ‘Fingerprint’. Initially deployed in CHO based biomanufacturing cell line development and media QC, Valitacell is adapting this platform for hMSC functional profiling, with potential applications in donor release and acceptance as well as media and process development, and optimisation.

Partner in the Spotlight: Valitacell2021-04-27T13:54:00+00:00
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